WEB-based GEne SeT AnaLysis Toolkit

Translating gene lists into biological insights...

Summary

Result Download

Job summary

  • Enrichment method: GSEA
  • Organism: mmusculus
  • Enrichment Categories: cell-type_Mouse_Cell_Atlas
  • Interesting list: Ranked list_DGE_squamousT11b_vs_all adenosadeno_HSE13-NT copy_1731453835.rnk. ID type: genesymbol
  • The interesting list contains 4821 user IDs in which 4708 user IDs are unambiguously mapped to 4708 unique entrezgene IDs and 113 user IDs can not be mapped to any entrezgene ID.
  • The GO Slim summary are based upon the 4708 unique entrezgene IDs.
  • Among the 4708 unique entrezgene IDs, 864 IDs are annotated to the selected functional categories, which are used for the enrichment analysis.

Parameters for the enrichment analysis:

  • Minimum number of IDs in the category: 5
  • Maximum number of IDs in the category: 2000
  • Significance Level: Top 10
  • Number of permutation: 1000

Based on the above parameters, 10 positive related categories and 9 negative related categories are identified as enriched categories and all are shown in this report.

GO Slim summary for the user uploaded IDs

Each Biological Process, Cellular Component and Molecular Function category is represented by a red, blue and green bar, repectively.

The height of the bar represents the number of IDs in the user list and also in the category.

Bar charts of enriched GO Slim terms

Enrichment Results

Redundancy reduction: None Weighted set cover